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microRNAs may sharpen spatial expression patterns

Biology – Quantitative Biology – Molecular Networks
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Microscopic Reversibility or Detailed Balance in Ion Channel Models

Biology – Quantitative Biology – Molecular Networks
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Mixed membership analysis of high-throughput interaction studies: Relational data

Biology – Quantitative Biology – Molecular Networks
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Model evaluation for glycolytic oscillations in yeast biotransformations of xenobiotics

Biology – Quantitative Biology – Molecular Networks
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Model of Transcriptional Activation by MarA in Escherichia coli

Biology – Quantitative Biology – Molecular Networks
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Model validation of simple-graph representations of metabolism

Biology – Quantitative Biology – Molecular Networks
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Modeling a simple enzyme reaction with delay and discretization

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Modeling coupled transcription, translation and degradation and miRNA-based regulation of this process

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Modeling for evolving biological networks with scale-free connectivity, hierarchical modularity, and disassortativity

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Modeling Genetic Networks from Clonal Analysis

Biology – Quantitative Biology – Molecular Networks
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Modeling Interactome: Scale-Free or Geometric?

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Modeling network dynamics: the lac operon, a case study

Biology – Quantitative Biology – Molecular Networks
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Modeling of negative autoregulated genetic networks in single cells

Biology – Quantitative Biology – Molecular Networks
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Modeling of the genetic switch of bacteriophage TP901-1: A heteromer of CI and MOR ensures robust bistability

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Modeling Protein Contact Networks

Biology – Quantitative Biology – Molecular Networks
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Modeling Stochasticity and Variability in Gene Regulatory Networks

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Modeling the effects of HIV-1 virions and proteins on Fas-induced apoptosis of infected cells

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Modular co-evolution of metabolic networks

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Modular model building

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Modularity and anti-modularity in networks with arbitrary degree distribution

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