Offdiagonal Complexity: A computationally quick complexity measure for graphs and networks
On Cycles in the Transcription Network of Saccharomyces cerevisiae
On dynamical network entropy in cancer
On persistence and cascade decompositions of chemical reaction networks
On Recursive Production and Evolvabilty of Cells: Catalytic Reaction Network Approach
On the basic computational structure of gene regulatory networks
On the equilibria of the MAPK cascade: cooperativity, modularity and bistability
On the functional properties of microRNA-mediated feed forward loops
On The Reconstruction of Interaction Networks with Applications to Transcriptional Regulation
On the relation between reactions and complexes of (bio)chemical reaction networks
On the role of conserved moieties in shaping the robustness and production capabilities of reaction networks
On the Stability of Metabolic Cycles
On the stability of Murray's testosterone model
On the structure of proten-protein interaction networks
One Hub-One Process: A Tool Based View on Regulatory Network Topology
Open Regulatory Networks and Modularity
Operating Regimes of Signaling Cycles: Statics, Dynamics, and Noise Filtering
Optimal Control of Evolutionary Dynamics
Optimal cytoplasmatic density and flux balance model under macromolecular crowding effects
Optimal Design of a Molecular Recognizer: Molecular Recognition as a Bayesian Signal Detection Problem