A new mechanism of development and differentiation through slow binding/unbinding of regulatory proteins to the genes

A Petri Net approach to the study of persistence in chemical reaction networks

A quantitative comparison of sRNA-based and protein-based gene regulation

A quantitative study of the benefits of co-regulation using the spoIIA operon as an example

A quantum spin approach to histone dynamics

A race model for singular olfactory receptor expression

A rate-distortion scenario for the emergence and evolution of noisy molecular codes

A SAT-Based Algorithm for Computing Attractors in Synchronous Boolean Networks

A self-organized model for cell-differentiation based on variations of molecular decay rates

A Self-Replicating Peptide Nucleic Acid

A simple negative interaction in the positive transcriptional feedback of a single gene is sufficient to produce reliable oscillations

A simple physical model for scaling in protein-protein interaction networks

A sparse regulatory network of copy-number driven expression reveals putative breast cancer oncogenes

A statistical mechanics approach to reverse engineering: sparsity and biological priors on gene regulatory networks

A statistical method for revealing form-function relations in biological networks

A stochastic spectral analysis of transcriptional regulatory cascades

A study on the combined interplay between stochastic fluctuations and the number of flagella in bacterial chemotaxis

A Systemic Receptor Network Triggered by Human cytomegalovirus Entry

A Variational Approach to Parameter Estimation in Ordinary Differential Equations

A variational principle for computing nonequilibrium fluxes and potentials in genome-scale biochemical networks