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$k$-noncrossing RNA structures with arc-length $\ge 3$

Biology – Quantitative Biology – Biomolecules
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3-10 and Pi-Helices: Stochastic Events on Sequence Space; Reasons and Implications of their Accidental Occurrences across Protein Universe

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36 degree step size of proton-driven c-ring rotation in FoF1-ATP synthase

Biology – Quantitative Biology – Biomolecules
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3D Protein Structure Predicted from Sequence

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5,6-dihydroxyindole-2-carboxylic acid (DHICA): a First Principles Density-Functional Study

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A base pairing model of duplex formation I: Watson-Crick pairing geometries

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A BIMA Array Search for Biomolecules in Comet Hale-Bopp(C/1995 O1)

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A Chemical Kinetic Model of Transcriptional Elongation

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A coarse-grained Langevin molecular dynamics approach to de novo protein structure prediction

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A complex adaptive systems approach to the kinetic folding of RNA

Biology – Quantitative Biology – Biomolecules
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A composite model for DNA torsion dynamics

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A Condensation-Ordering Mechanism in Nanoparticle-Catalyzed Peptide Aggregation

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A Constructive Approach to Gene Expression Dynamics

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A contact-waiting-time metric and RNA folding rates

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A double-deletion method to quantifying incremental binding energies in proteins from experiment. Example of a destabilizing hydrogen bonding pair

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A Finite Element framework for computation of protein normal modes and mechanical response

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A First Principles Density-Functional Calculation of the Electronic and Vibrational Structure of the Key Melanin Monomers

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A first-principles model of early evolution: Emergence of gene families, species and preferred protein folds

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A folding inhibitor of the HIV-1 Protease

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A Generalized Theory of DNA Looping and Cyclization

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