Stretching Single Domain Proteins: Phase Diagram and Kinetics of Force-Induced Unfolding

Physics – Condensed Matter – Soft Condensed Matter

Scientific paper

Rate now

  [ 0.00 ] – not rated yet Voters 0   Comments 0

Details

12 pages, Latex, 6 ps figures

Scientific paper

10.1073/pnas.96.11.6166

Single molecule force spectroscopy reveals unfolding of domains in titin upon stretching. We provide a theoretical framework for these experiments by computing the phase diagrams for force-induced unfolding of single domain proteins using lattice models. The results show that two-state folders (at zero force) unravel cooperatively whereas stretching of non-two-state folders occurs through intermediates. The stretching rates of individual molecules show great variations reflecting the heterogeneity of force-induced unfolding pathways. The approach to the stretched state occurs in a step-wise "quantized" manner. Unfolding dynamics depends sensitively on topology. The unfolding rates increase exponentially with force f till an optimum value which is determined by the barrier to unfolding when f=0. A mapping of these results to proteins shows qualitative agreement with force-induced unfolding of Ig-like domains in titin. We show that single molecule force spectroscopy can be used to map the folding free energy landscape of proteins in the absence of denaturants.

No associations

LandOfFree

Say what you really think

Search LandOfFree.com for scientists and scientific papers. Rate them and share your experience with other people.

Rating

Stretching Single Domain Proteins: Phase Diagram and Kinetics of Force-Induced Unfolding does not yet have a rating. At this time, there are no reviews or comments for this scientific paper.

If you have personal experience with Stretching Single Domain Proteins: Phase Diagram and Kinetics of Force-Induced Unfolding, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Stretching Single Domain Proteins: Phase Diagram and Kinetics of Force-Induced Unfolding will most certainly appreciate the feedback.

Rate now

     

Profile ID: LFWR-SCP-O-218782

  Search
All data on this website is collected from public sources. Our data reflects the most accurate information available at the time of publication.