Simple models of proteins with repulsive non-native contacts

Details Simple models of proteins with repulsive non-native contacts Simple models of proteins with repulsive non-native contacts

1999-04-29

arxiv.org/abs/cond-mat/9904421v1

Physics

Condensed Matter

Soft Condensed Matter

6 pages, latex, 9 figures, submitted to Phys. Rev. E

Scientific paper

10.1007/s100510051090

The Go model is extended to the case when the non-native contact energies may
be either attractive or repulsive. The folding temperature is found to increase
with the energy of non-native contacts. The repulsive non-native contact
energies may lead to folding at T=0 for some two-dimensional sequences and to
reduction in complexity of disconnectivity graphs for local energy minima.

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