Physics – Condensed Matter – Soft Condensed Matter
Scientific paper
2010-02-10
Eur. Phys. J. E 30, 7-18 (2009)
Physics
Condensed Matter
Soft Condensed Matter
Scientific paper
10.1140/epje/i2009-10497-3
In this work we investigate structural properties of native states of a simple model for short flexible homopolymers, where the steric influence of monomeric side chains is effectively introduced by a thickness constraint. This geometric constraint is implemented through the concept of the global radius of curvature and affects the conformational topology of ground-state structures. A systematic analysis allows for a thickness-dependent classification of the dominant ground-state topologies. It turns out that helical structures, strands, rings, and coils are natural, intrinsic geometries of such tubelike objects.
Bachmann Michael
Janke Wolfhard
Neuhaus Thomas
Vogel Thomas
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