Physics – Condensed Matter – Soft Condensed Matter
Scientific paper
2011-11-21
Physics
Condensed Matter
Soft Condensed Matter
7 pages, 3 figures
Scientific paper
We present a Brownian dynamics model of driven polymer translocation, in which non-equilibrium memory effects arising from tension propagation (TP) along the cis side subchain are incorporated as a time-dependent friction. To solve the effective friction, we develop a finite chain length TP formalism, expanding on the work of Sakaue [Sakaue, PRE 76, 021803 (2007)]. The model, solved numerically, yields results in excellent agreement with molecular dynamics simulations in a wide range of parameters. Our results show that non-equilibrium TP along the cis side subchain dominates the dynamics of driven translocation. In addition, the model explains the different scaling of translocation time w.r.t chain length observed both in experiments and simulations as a combined effect of finite chain length and pore-polymer interactions.
Ala-Nissila Tapio
Bhattacharya Aniket
Ikonen Timo
Sung Wokyung
No associations
LandOfFree
Unifying model of driven polymer translocation does not yet have a rating. At this time, there are no reviews or comments for this scientific paper.
If you have personal experience with Unifying model of driven polymer translocation, we encourage you to share that experience with our LandOfFree.com community. Your opinion is very important and Unifying model of driven polymer translocation will most certainly appreciate the feedback.
Profile ID: LFWR-SCP-O-376268