Physics – Condensed Matter – Soft Condensed Matter
Scientific paper
2009-01-08
Physics
Condensed Matter
Soft Condensed Matter
5 pages, 6 figures
Scientific paper
Bartussek, Hanggi and Kissner studied a rocking ratchet system, in which a Brownian particle is subject to an asymmetric periodic potential together with an oscillating force, and found that the direction of the macroscopic current can be reversed by changing the parameter values characterizing the model [Europhys. Lett., 28 (1994) 459]. In this letter, we apply their ratchet theory to a rotary motor-protein, F1-ATPase. In this work, we construct a model of a rocking ratchet in which F1-ATPase rotates not as a result of ATP hydrolysis but through the influence of an oscillating force. We then study the motion of F1-ATPase on the basis of molecular dynamics simulations of this coarse-grained protein model. Although in the absence of ATP, F1-ATPase exhibits directionless Brownian motion when there exists no oscillating force, we observe directional motion when we do apply an oscillating force. Furthermore, we observe that the direction of rotation is reversed when we change the oscillation frequency.
Hayashi Kumiko
Takano Mitsunori
Yamasaki Hisatsugu
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