Mechanical limits of viral capsids

Details Mechanical limits of viral capsids Mechanical limits of viral capsids

2007-03-14

arxiv.org/abs/cond-mat/0703370v1

Physics

Condensed Matter

Materials Science

6 pages, 9 figures

Scientific paper

10.1073/pnas.0611472104

We study the elastic properties and mechanical stability of viral capsids under external force-loading with computer simulations. Our approach allows the implementation of specific geometries corresponding to specific phages such as $\phi$29 and CCMV. We demonstrate how in a combined numerical and experimental approach the elastic parameters can be determined with high precision. The experimentally observed bimodality of elastic spring constants is shown to be of geometrical origin, namely the presence of pentavalent units in the viral shell. A criterion for capsid breakage is defined, which explains well the experimentally observed rupture. From our numerics we find for the dependence of the rupture force on the F\"oppl-von K\'arm\'an (FvK) number a crossover from $\gamma^{2/3}$ to $\gamma^{1/2}$. For filled capsids high internal pressures lead to a stronger destabilization of viruses with a buckled ground state than unbuckled ones. Finally, we show how our numerically calculated energy maps can be used to extract information about the strength of protein-protein interactions from rupture experiments.

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