Kinetic non-optimality and vibrational stability of proteins

Details Kinetic non-optimality and vibrational stability of proteins Kinetic non-optimality and vibrational stability of proteins

2001-02-18

arxiv.org/abs/cond-mat/0102316v1

Physics

Condensed Matter

Statistical Mechanics

REVTex, Proteins: Function, Structure and Genetics - in press

Scientific paper

Scaling of folding times in Go models of proteins and of decoy structures with the Lennard-Jones potentials in the native contacts reveal %robust power law trends when studied under optimal folding conditions. The power law exponent depends on the type of native geometry. Its value indicates lack of kinetic optimality in the model proteins. In proteins, mechanical and thermodynamic stabilities are correlated.

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