Folding, Design and Determination of Interaction Potentials Using Off-Lattice Dynamics of Model Heteropolymers

Physics – Condensed Matter – Statistical Mechanics

Scientific paper

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8 pages, 3 Postscript figures, uses RevTeX. Submitted to Physical Review Letters

Scientific paper

10.1103/PhysRevLett.81.3287

We present the results of a self-consistent, unified molecular dynamics study
of simple model heteropolymers in the continuum with emphasis on folding,
sequence design and the determination of the interaction parameters of the
effective potential between the amino acids from the knowledge of the native
states of the designed sequences.

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