Physics – Condensed Matter – Disordered Systems and Neural Networks
Scientific paper
2010-08-23
Physics
Condensed Matter
Disordered Systems and Neural Networks
5 pages, 3 figures
Scientific paper
We present a computational method for finding attractors (ergodic sets of states) of Boolean networks under asynchronous update. The approach is based on a systematic removal of state transitions to render the state transition graph acyclic. In this reduced state transition graph, all attractors are fixed points that can be enumerated with little effort in most instances. This attractor set is then extended to the attractor set of the original dynamics. Our numerical tests on standard Kauffman networks indicate that the method is efficient in the sense that the total number of state vectors visited grows moderately with the number of states contained in attractors.
Klemm Konstantin
Skodawessely Thomas
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