Biology – Quantitative Biology – Molecular Networks
Scientific paper
2011-05-12
Biology
Quantitative Biology
Molecular Networks
17 pages, 7 images
Scientific paper
We establish that mass conserving single terminal-linkage networks of chemical reactions admit positive steady states regardless of network deficiency and the choice of reaction rate constants. This result holds for closed systems without material exchange across the boundary, as well as for open systems with material exchange at rates that satisfy a simple sufficient and necessary condition. Our proof uses a fixed point of a novel convex optimization formulation to find the steady state behavior of chemical reaction networks that satisfy the law of mass-action kinetics. A fixed point iteration can be used to compute these steady states, and we show that it converges for weakly reversible homogeneous systems. We report the results of our algorithm on numerical experiments.
Akle Santiago
Dalal Onkar
Fleming Ronan M. T.
Saunders Michael
Taheri Nicole
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