Complete Phase Diagram of DNA Unzipping: Eye, Y-fork and triple point

Physics – Condensed Matter – Soft Condensed Matter

Scientific paper

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4 pages, 4 figures; revised version: misprints corrected. References corrected/added. To appear in Physical Review Letters

Scientific paper

10.1103/PhysRevLett.93.248102

We study the unzipping of double stranded DNA (dsDNA) by applying a pulling
force at a fraction $s$ $(0 \le s \le 1)$ from the anchored end. From exact
analytical and numerical results, the complete phase diagram is presented. The
phase diagram shows a strong ensemble dependence for various values of $s$. In
addition, we show the existence of an ``eye'' phase and a triple point.

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