A simple model for the relative stabilities of DNA hairpin structure

Physics – Condensed Matter – Soft Condensed Matter

Scientific paper

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8 pages (in Revtex4), 4 eps figs.; submitted to Phys. Rev. E

Scientific paper

A model of self-avoiding walk with suitable constraints on self-attraction is
developed to describe the conformational behaviour of a single stranded short
DNA molecule that form hairpin structure. Using exact enumeration method we
calculate the properties associated with coil-hairpin transition. Our results
are in qualitative agreement with the experiment.

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