Optimal target search on a fast folding polymer chain with volume exchange

Physics – Condensed Matter – Soft Condensed Matter

Scientific paper

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4 pages, 3 figures, REVTeX

Scientific paper

10.1103/PhysRevLett.95.260603

We study the search process of a target on a rapidly folding polymer (`DNA')
by an ensemble of particles (`proteins'), whose search combines 1D diffusion
along the chain, Levy type diffusion mediated by chain looping, and volume
exchange. A rich behavior of the search process is obtained with respect to the
physical parameters, in particular, for the optimal search.

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