PERM: A Monte Carlo Strategy for Simulating Polymers and Other Things

Details PERM: A Monte Carlo Strategy for Simulating Polymers and Other Things PERM: A Monte Carlo Strategy for Simulating Polymers and Other Things

1998-06-26

arxiv.org/abs/cond-mat/9806321v1

Physics

Condensed Matter

Soft Condensed Matter

17 pages, 10 figures, needs mprocl.sty (included), appears in Workshop on: Monte Carlo Approach to Biopolymers and Protein Fol

Scientific paper

We describe a general strategy, PERM (Pruned-Enriched Rosenbluth Method), for sampling configurations from a given Gibbs-Boltzmann distribution. The method is not based on the Metropolis concept of establishing a Markov process whose stationary state is the wanted distribution. Instead, it starts off building instances according to a biased distribution, but corrects for this by cloning "good" and killing "bad" configurations. In doing so, it uses the fact that nontrivial problems in statistical physics are high dimensional. Therefore, instances are built step by step, and the final "success" of an instance can be guessed at an early stage. Using weighted samples, this is done so that the final distribution is strictly unbiased. In contrast to evolutionary algorithms, the cloning/killing is done without simultaneously keeping a large population in computer memory. We apply this in large scale simulations of homopolymers near the theta and unmixing critical points. In addition we sketch other applications, notably to polymers in confined geometries and to randomly branched polymers. For theta polymers we confirm the very strong logarithmic corrections found in previous work. For critical unmixing we essentially confirm the Flory-Huggins mean field theory and the logarithmic corrections to it computed by Duplantier. We suggest that the latter are responsible for some apparent violations of mean field behavior. This concerns in particular the exponent for the chain length dependence of the critical density which is 1/2 in Flory-Huggins theory, but is claimed to be $\approx 0.38$ in several experiments.

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