What one can learn from experiments about the elusive transition state?

Biology – Quantitative Biology – Biomolecules

Scientific paper

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Protein Science in press

Scientific paper

We present the results of an exact analysis of a model energy landscape of a
protein to clarify the notion of the transition state and the physical meaning
of the $\phi$ values determined in protein engineering experiments. We
benchmark our findings to various theoretical approaches proposed in the
literature for the identification and characterization of the transition state.

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