Physics – Biological Physics
Scientific paper
2012-04-25
Physics
Biological Physics
6 pages, 6 figures, to be published in Europhysics Letters
Scientific paper
The dynamics of the DNA denaturation is studied using the Peyrard-Bishop-Dauxois model. The denaturation rate of double stranded polymers decreases exponentially as function of length below the denaturation temperature. Above Tc, the rate shows a minimum, but then increases as function of length. We also examine the influence of sequence and solvent friction. Molecules having the same number of weak and strong base-pairs can have significantly different opening rates depending on the order of base-pairs.
Peyrard Michel
van Erp Titus S.
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