Physics – Biological Physics
Scientific paper
2007-06-12
Phys. Rev. E 76, 021921 (2007)
Physics
Biological Physics
6 pages, 10 figures, submitted to Phys. Rev. E
Scientific paper
10.1103/PhysRevE.76.021921
We propose a new simple model for DNA denaturation bases on the pendulum model of Englander\cite{A1} and the microscopic model of Peyrard {\it et al.},\cite{A3} so called "combined model". The main parameters of our model are: the coupling constant $k$ along each strand, the mean stretching $y^\ast$ of the hydrogen bonds, the ratio of the damping constant and driven force $\gamma/F$. We show that both the length $L$ of unpaired bases and the velocity $v$ of kinks depend on not only the coupling constant $k$ but also the temperature $T$. Our results are in good agreement with previous works.
Hien D. L.
Ngo Thanh V.
Nhan N. T.
Viet Nguyen Ai
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