Network properties of protein structures

Details Network properties of protein structures Network properties of protein structures

2004-08-13

arxiv.org/abs/q-bio/0408009v1

Physica A, 346/1-2 (2005) pp. 27-33

Biology

Quantitative Biology

Molecular Networks

5 pages, 7 postscript figures, Accepted for publication in Physica A

Scientific paper

10.1016/j.physa.2004.08.046

Protein structures can be studied as complex networks of interacting amino acids. We study proteins of different structural classes from the network perspective. Our results indicate that proteins, regardless of their structural class, show small-world network property. Various network parameters offer insight into the structural organisation of proteins and provide indications of modularity in protein networks.

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