Hidden Structure in Protein Energy Landscapes

Details Hidden Structure in Protein Energy Landscapes Hidden Structure in Protein Energy Landscapes

2007-06-26

arxiv.org/abs/0706.3878v2

Biology

Quantitative Biology

Biomolecules

11 pages, 4 figures; corrected citation of Ref. 10

Scientific paper

10.1103/PhysRevE.77.021902

Inherent structure theory is used to discover strong connections between simple characteristics of protein structure and the energy landscape of a Go model. The potential energies and vibrational free energies of inherent structures are highly correlated, and both reflect simple measures of networks of native contacts. These connections have important consequences for models of protein dynamics and thermodynamics.

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