Physics – Biological Physics
Scientific paper
2010-09-21
Physics
Biological Physics
13 pages, 10 figures
Scientific paper
Motivated by experimentally observed biocompatibility enhancement of nanoengineered cubic zirconia ZrO2 coatings to mesenchymal stromal cells, we have carried out computational analysis of the initial immobilization of one of known structural fragment of the adhesive protein (fibronectin) on the corresponding surface. We constructed an atomistic model of the zirconia nano-hillock of 3-fold symmetry based on AFM and TEM images. First-principle quantum-mechanical calculations show a substantial variation of electrostatic potential at the hillock due to the presence of surface features such as edges and vertexes. Using an implemented Monte Carlo simulated annealing method we found the orientation of the immobilized protein on the zirconia surface (both flat and nanostructured) and contribution of the each amino acid residue from the protein sequence to the adsorption energy. Accounting for the variation of the dielectric permittivity at the protein-implant interface we use a model distance-dependent dielectric function to describe the inter-atom electrostatic (Coulomb) interactions in the adsorption potential. We find that the initial immobilization of the rigid protein fragment on the nanostructured pyramidal ZrO2 surface is achieved with magnitude of adsorption energy larger than the one for the protein on the smooth (flat) surface. The strong attractive electrostatic interactions are a major factor in the enhanced adsorption at nanostructured surface that is absent in the case of adsorption on the flat uncharged surface. We show that the best electrostatic and steric fit of the protein to the inorganic surface corresponds to a minimum of the adsorption energy determined by the non-covalent interactions.
Namavar F.
Rubinstein A.
Sabirianov Renat F.
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