Effects of long-range dispersion in nonlinear dynamics of DNA molecules

Physics – Biological Physics

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19 pages, 6 figures, in Proc. "Nonlinear Cooperative Phenomena in Biological Systems", Ed.: L. Matsson (World Scientific, Sing

Scientific paper

A discrete nonlinear Schrodinger (NLS) model with long-range dispersive interactions describing the dynamical structure of DNA is proposed. Dispersive interactions of two types: the power dependence $r^{-s}$ and the exponential dependence $e^{-\beta r}$ on the distance, $r$, are studied. For $s$ less than some critical value, $s_{cr}$, and similarly for $\beta \leq \beta_{cr}$ there is an interval of bistability where two stable stationary states: narrow, pinned states and broad, mobile states exist at each value of the total energy. For cubic nonlinearity the bistability of the solitons occurs for dipole-dipole dispersive interaction $(s=3)$, and for the inverse radius of the dispersive interaction $\beta \leq \beta_{cr}=1.67$. For increasing degree of nonlinearity, $\sigma$, the critical values $s_{cr}$ and $\beta_{cr}$ increase. The long-distance behavior of the intrinsically localized states depends on $s$. For $s>3$ their tails are exponential while for $2

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