A non-equilibrium dynamic mechanism for the allosteric effect

Physics – Biological Physics

Scientific paper

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accepted by Phys. Rev. Lett. Major revisions were made to fit the style. 4 pages, 2 figures

Scientific paper

10.1103/PhysRevLett.99.168103

Allosteric regulation is often viewed as thermodynamic in nature. However protein internal motions during an enzymatic reaction cycle can be slow hopping processes over numerous potential barriers. We propose that regulating molecules may function by modifying the nonequilibrium protein dynamics. The theory predicts that an enzyme under the new mechanism has different temperature dependence, waiting time distribution of the turnover cycle, and dynamic fluctuation patterns with and without effector. Experimental tests of the theory are proposed.

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