Pair HMM based gap statistics for re-evaluation of indels in alignments with affine gap penalties: Extended Version

Pairwise maximum entropy models for studying large biological systems: when they can and when they can't work

Parallel GPU Implementation of Iterative PCA Algorithms

Parallel multi-objective algorithms for the molecular docking problem

Parameter Estimation in Biokinetic Degradation Models in Wastewater Treatment - A Novel Approach Relevant for Micro-pollutant Removal

Parameter Identification for Markov Models of Biochemical Reactions

Parameter inference and model selection in signaling pathway models

Parameter Inference for an Individual Based Model of Chytridiomycosis in Frogs

Partition Decoupling for Multi-gene Analysis of Gene Expression Profiling Data

Pathways of Distinction Analysis: a new technique for multi-SNP analysis of GWAS data

Pattern overlapping decomposition by Cumulative Local Cross-Correlation

Pattern-based phylogenetic distance estimation and tree reconstruction

PCA and K-Means decipher genome

Percolation in clustered networks

Perfect Reconstruction of Oncogenetic Trees

Perfect Sampling of the Master Equation for Gene Regulatory Networks

Periodic solutions of piecewise affine gene network models: the case of a negative feedback loop

Persistence length of chromatin determines origin spacing in Xenopus early-embryo DNA replication: Quantitative comparisons between theory and experiment

Persistence of direction increases the drift velocity of run and tumble chemotaxis

Perturbed and Permuted: Signal Integration in Network-Structured Dynamic Systems