Weighted-Codon-Usage Based Phylogeny In Ectocarpales

Details Weighted-Codon-Usage Based Phylogeny In Ectocarpales Weighted-Codon-Usage Based Phylogeny In Ectocarpales

2005-06-06

arxiv.org/abs/q-bio/0506003v1

Journal of Bioscience, 30(5),699--709(2005)

Biology

Quantitative Biology

Genomics

Scientific paper

We analyse forty seven chloroplastid genes of the large subunit of RuBisCO, from the Algal order Ectocarpales, sourced from GenBank. Codon-usage weighted by the nucleotide base bias defines our score called the Codon-Impact-Parameter. This score is used to obtain phylogenetic relations amongst the 47 Ectocarpales. We compare our classification with the ones done earlier.

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