RAId DbS: A Mass-Spectrometry Based Peptide Identification Web Server with Knowledge Integration

Details RAId DbS: A Mass-Spectrometry Based Peptide Identification Web Server with Knowledge Integration RAId DbS: A Mass-Spectrometry Based Peptide Identification Web Server with Knowledge Integration

2008-03-17

arxiv.org/abs/0803.2395v1

Biology

Quantitative Biology

Quantitative Methods

6 pages, 2 figures

Scientific paper

Summary: In anticipation of the individualized proteomics era and the need to integrate knowledge from disease studies, we have augmented our peptide identification software RAId DbS to take into account annotated single amino acid polymorphisms, post-translational modifications, and their documented disease associations while analyzing a tandem mass spectrum. To facilitate new discoveries, RAId DbS allows users to conduct searches permitting novel polymorphisms. Availability: The webserver link is http://www.ncbi.nlm.nih.gov/ /CBBResearch/qmbp/raid dbs/index.html. The relevant databases and binaries of RAId DbS for Linux, Windows, and Mac OS X are available from the same web page. Contact: yyu@ncbi.nlm.nih.gov

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