Primitive Molecular Machine Scenario for the Origin of the Three Base Codon Composition

Details Primitive Molecular Machine Scenario for the Origin of the Three Base Codon Composition Primitive Molecular Machine Scenario for the Origin of the Three Base Codon Composition

Mar 1999

adsabs.harvard.edu/cgi-bin/nph-data_query?bibcode=1999oleb...29..203m&link_type=abstract

Origins of Life and Evolution of the Biosphere, v. 29, Issue 2, p. 203-214 (1999).

Computer Science

Scientific paper

We set up a scenario for the operation of primordial synthesis machines operating in outer space quasi one dimensional channels, where polymers interact with fixed particles. The scheme allows for polymerization, translocation and translation. We will show that under very general conditions the particle/polymer interaction potential has spatial regularities with an average distance of three between neighboring minima. We present a model that exhibits how primitive molecular machines may convert the structural properties of the potential into locomotion regularities. On average, polymer movement takes place by shifts with long time intervals every three displacements. We argue that this feature is generic and lies at the origin of the three base codon composition.

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