Positioning Crenarchaeal tRNA-Introns

Details Positioning Crenarchaeal tRNA-Introns Positioning Crenarchaeal tRNA-Introns

2005-08-16

arxiv.org/abs/q-bio/0508019v1

Biology

Quantitative Biology

Genomics

15 pages, 2 figures

Scientific paper

We precisely position a noncanonical intron in the odd second copy of tRNAAsp(GTC) gene in the newly sequenced crenarchaea S.acidocaldarius. The uniform assortment of some features from normal aspartate tDNA and some from those corresponding to non-standard amino acids conduce us to conjecture it to be a novel tRNA gene, probably coding for a modified aspartate residue. Further we reposition intron in tRNAHis(GUG) gene in P.aerophilum.The BHB motif at the exon-intron boundaries are re-analyzed and found to support our conjectures.

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