Information Capacity of Biological Macromoleculae Reloaded

Details Information Capacity of Biological Macromoleculae Reloaded Information Capacity of Biological Macromoleculae Reloaded

2005-01-10

arxiv.org/abs/q-bio/0501011v1

Biology

Quantitative Biology

Genomics

12 pages, no figures, two-column, 10 pt

Scientific paper

Information capacity of a symbol sequence is a measure of the unexpectedness of a continuation of given string of symbols. Continuation of a string is determined through the maximum entropy of the reconstructed frequency dictionary; the capacity, in turn, is determined through the calculation of mutual entropy of a real frequency dictionary of a sequence with respect to the reconstructed one. The capacity does not depend on the length of strings in a dictionary. The capacity calculated for various genomes exhibits a multi-minima pattern reflecting an order observed within a sequence.

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