Biology – Quantitative Biology – Populations and Evolution
Scientific paper
2010-10-24
Biology
Quantitative Biology
Populations and Evolution
9 pages, 7 figures, 2 tables; http://cse.ucdavis.edu/~cmg/compmech/pubs/ss.htm
Scientific paper
We show that autocatalytic networks of epsilon-machines and their population dynamics differ substantially between spatial (geographically distributed) and nonspatial (panmixia) populations. Generally, regions of spacetime-invariant autocatalytic networks---or domains---emerge in geographically distributed populations. These are separated by functional membranes of complementary epsilon-machines that actively translate between the domains and are responsible for their growth and stability. We analyze both spatial and nonspatial populations, determining the algebraic properties of the autocatalytic networks that allow for space to affect the dynamics and so generate autocatalytic domains and membranes. In addition, we analyze populations of intermediate spatial architecture, delineating the thresholds at which spatial memory (information storage) begins to determine the character of the emergent auto-catalytic organization.
Crutchfield James P.
Piantadosi Steve T.
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