Computer Science – Databases
Scientific paper
2009-06-13
Computer Science
Databases
Submitted to Data Mining and Knowledge Discovery (DMKD). 33 pages, 19 figures, and 8 tables
Scientific paper
Among many existing distance measures for time series data, Dynamic Time Warping (DTW) distance has been recognized as one of the most accurate and suitable distance measures due to its flexibility in sequence alignment. However, DTW distance calculation is computationally intensive. Especially in very large time series databases, sequential scan through the entire database is definitely impractical, even with random access that exploits some index structures since high dimensionality of time series data incurs extremely high I/O cost. More specifically, a sequential structure consumes high CPU but low I/O costs, while an index structure requires low CPU but high I/O costs. In this work, we therefore propose a novel indexed sequential structure called TWIST (Time Warping in Indexed Sequential sTructure) which benefits from both sequential access and index structure. When a query sequence is issued, TWIST calculates lower bounding distances between a group of candidate sequences and the query sequence, and then identifies the data access order in advance, hence reducing a great number of both sequential and random accesses. Impressively, our indexed sequential structure achieves significant speedup in a querying process by a few orders of magnitude. In addition, our method shows superiority over existing rival methods in terms of query processing time, number of page accesses, and storage requirement with no false dismissal guaranteed.
Niennattrakul Vit
Ratanamahatana Chotirat Ann
Ruengronghirunya Pongsakorn
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