A DNA Sequence Compression Algorithm Based on LUT and LZ77

Details A DNA Sequence Compression Algorithm Based on LUT and LZ77 A DNA Sequence Compression Algorithm Based on LUT and LZ77

2005-04-25

arxiv.org/abs/cs/0504100v6

Computer Science

Information Theory

13 pages,3 tables,with source code of our algorithm

Scientific paper

This article introduces a new DNA sequence compression algorithm which is
based on LUT and LZ77 algorithm. Combined a LUT-based pre-coding routine and
LZ77 compression routine,this algorithm can approach a compression ratio of
1.9bits \slash base and even lower.The biggest advantage of this algorithm is
fast execution, small memory occupation and easy implementation.

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